Andrew David King

Some Graphs

Kingy — Wed, 24 Feb 2010 19:40:55 +0000

6hr after

RNA Degradation

Volcano Plot

Test

Kingy — Fri, 19 Feb 2010 18:50:14 +0000

Wordpress version test.

Java code test

Kingy — Tue, 09 Feb 2010 20:41:49 +0000


package biotest;

import java.util.Iterator;
import org.biojava.bio.BioException;
import org.biojava.bio.seq.DNATools;
import org.biojava.bio.symbol.FiniteAlphabet;
import org.biojava.bio.symbol.Symbol;

public class Main {

    public static void main(String[] args) throws BioException {
        Main t = new Main();
        t.trial();
    }

    public void trial() {
        FiniteAlphabet dna = DNATools.getDNA();
        Iterator dnaSymbols = dna.iterator();
        while (dnaSymbols.hasNext()) {
            Symbol s = (Symbol) dnaSymbols.next();
            System.out.println(s.getName());
        }
    }

}

Autoregulatory Model

Kingy — Thu, 04 Feb 2010 21:50:01 +0000

Reactions:


Repression:
DNA+P2 -> DNA.P2
DNA.P2 -> DNA + P2

Transcription:
DNA -> DNA + RNA

Translation:
RNA -> RNA + P

Dimerisation:
2P -> P2
P2 -> 2P

Degradation:
RNA -> Ø
P -> Ø

Welcome

Kingy — Mon, 09 Nov 2009 20:03:02 +0000

Welcome to my blog and website.